Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 AL645728.2-201ENST00000641974 660 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 AL023775.1-201ENST00000454907 1746 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.8□□□□□ -0.68
CXCL5P42830 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
CXCL5P42830 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CXCL5P42830 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
CXCL5P42830 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.79□□□□□ -0.68
CXCL5P42830 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 AP002469.2-201ENST00000531724 424 ntBASIC10.79□□□□□ -0.68
CXCL5P42830 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC10.79□□□□□ -0.68
CXCL5P42830 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 LCK-206ENST00000373564 2137 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CXCL5P42830 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CXCL5P42830 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.79□□□□□ -0.68
CXCL5P42830 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.78□□□□□ -0.68
CXCL5P42830 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL5P42830 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.78□□□□□ -0.68
CXCL5P42830 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CXCL5P42830 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms