Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC103702.1-201ENST00000548801 2630 ntBASIC14.38□□□□□ -0.11
APOBEC1P41238 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.38□□□□□ -0.11
APOBEC1P41238 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOBEC1P41238 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 MST1L-201ENST00000442552 2185 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOBEC1P41238 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APOBEC1P41238 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.37□□□□□ -0.11
APOBEC1P41238 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 AC092183.1-201ENST00000469884 875 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.37□□□□□ -0.11
APOBEC1P41238 HNRNPUP1-201ENST00000554987 333 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOBEC1P41238 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.37□□□□□ -0.11
APOBEC1P41238 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.37□□□□□ -0.11
APOBEC1P41238 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.37□□□□□ -0.11
APOBEC1P41238 AC097359.3-201ENST00000603982 1210 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 TEX28P1-201ENST00000613479 1221 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 TEX28P2-201ENST00000617764 1221 ntBASIC14.37□□□□□ -0.11
APOBEC1P41238 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
APOBEC1P41238 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
APOBEC1P41238 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.37□□□□□ -0.11
APOBEC1P41238 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.37□□□□□ -0.11
APOBEC1P41238 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APOBEC1P41238 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOBEC1P41238 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.37□□□□□ -0.11
APOBEC1P41238 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 LINC00554-201ENST00000564841 3011 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOBEC1P41238 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 MIR943-201ENST00000401286 94 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.36□□□□□ -0.11
APOBEC1P41238 AC097493.3-201ENST00000509725 367 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.36□□□□□ -0.11
APOBEC1P41238 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.36□□□□□ -0.11
APOBEC1P41238 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOBEC1P41238 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
APOBEC1P41238 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.36□□□□□ -0.11
APOBEC1P41238 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.36□□□□□ -0.11
APOBEC1P41238 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms