Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL4P13236 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CCL4P13236 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CCL4P13236 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CCL4P13236 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.9□□□□□ -0.02
CCL4P13236 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL4P13236 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL4P13236 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCL4P13236 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.9□□□□□ -0.02
CCL4P13236 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCL4P13236 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.89□□□□□ -0.03
CCL4P13236 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCL4P13236 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL4P13236 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL4P13236 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 AC026954.1-201ENST00000429771 1293 ntBASIC14.89□□□□□ -0.03
CCL4P13236 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.89□□□□□ -0.03
CCL4P13236 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL4P13236 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.89□□□□□ -0.03
CCL4P13236 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL4P13236 MIR6787-201ENST00000616675 61 ntBASIC14.89□□□□□ -0.03
CCL4P13236 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCL4P13236 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCL4P13236 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.89□□□□□ -0.03
CCL4P13236 AC092364.2-201ENST00000596710 2692 ntBASIC14.89□□□□□ -0.03
CCL4P13236 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.89□□□□□ -0.03
CCL4P13236 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 KRT8P44-201ENST00000441609 1350 ntBASIC14.88□□□□□ -0.03
CCL4P13236 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCL4P13236 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 AC108725.1-201ENST00000495472 409 ntBASIC14.88□□□□□ -0.03
CCL4P13236 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.88□□□□□ -0.03
CCL4P13236 AP001582.1-201ENST00000525856 295 ntBASIC14.88□□□□□ -0.03
CCL4P13236 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL4P13236 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CCL4P13236 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 AL606495.2-201ENST00000605867 535 ntBASIC14.88□□□□□ -0.03
CCL4P13236 AC107373.2-201ENST00000607735 490 ntBASIC14.88□□□□□ -0.03
CCL4P13236 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.88□□□□□ -0.03
CCL4P13236 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.88□□□□□ -0.03
CCL4P13236 AD000864.1-201ENST00000624076 2295 ntBASIC14.88□□□□□ -0.03
CCL4P13236 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CCL4P13236 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CCL4P13236 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCL4P13236 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms