Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CYP3A4P08684 TNRC18P3-201ENST00000441896 2691 ntBASIC17.74■□□□□ 0.43
CYP3A4P08684 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CYP3A4P08684 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.73■□□□□ 0.43
CYP3A4P08684 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.73■□□□□ 0.43
CYP3A4P08684 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.73■□□□□ 0.43
CYP3A4P08684 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.73■□□□□ 0.43
CYP3A4P08684 NME2P1-201ENST00000426182 414 ntBASIC17.73■□□□□ 0.43
CYP3A4P08684 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.73■□□□□ 0.43
CYP3A4P08684 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.73■□□□□ 0.43
CYP3A4P08684 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.73■□□□□ 0.43
CYP3A4P08684 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.73■□□□□ 0.43
CYP3A4P08684 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.73■□□□□ 0.43
CYP3A4P08684 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.73■□□□□ 0.43
CYP3A4P08684 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.73■□□□□ 0.43
CYP3A4P08684 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CYP3A4P08684 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CYP3A4P08684 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.72■□□□□ 0.43
CYP3A4P08684 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 COX5BP8-201ENST00000416911 349 ntBASIC17.72■□□□□ 0.43
CYP3A4P08684 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 GAPDHP40-201ENST00000505218 1006 ntBASIC17.72■□□□□ 0.43
CYP3A4P08684 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 CR383656.12-201ENST00000549567 513 ntBASIC17.72■□□□□ 0.43
CYP3A4P08684 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.72■□□□□ 0.43
CYP3A4P08684 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.72■□□□□ 0.43
CYP3A4P08684 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 WFDC1-204ENST00000613603 549 ntBASIC17.72■□□□□ 0.43
CYP3A4P08684 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 PKD1P1-201ENST00000458669 6805 ntBASIC17.72■□□□□ 0.43
CYP3A4P08684 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CYP3A4P08684 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CYP3A4P08684 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CYP3A4P08684 AC105250.1-201ENST00000509378 2057 ntBASIC17.71■□□□□ 0.43
CYP3A4P08684 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CYP3A4P08684 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CYP3A4P08684 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CYP3A4P08684 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CYP3A4P08684 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CYP3A4P08684 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.71■□□□□ 0.43
CYP3A4P08684 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CYP3A4P08684 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CYP3A4P08684 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms