Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AL390755.1-201ENST00000623716 2027 ntBASIC12.16□□□□□ -0.46
TCRAP04437 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.16□□□□□ -0.46
TCRAP04437 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TCRAP04437 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.15□□□□□ -0.46
TCRAP04437 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 AC232323.1-201ENST00000540724 2099 ntBASIC12.15□□□□□ -0.46
TCRAP04437 REXO1L5P-201ENST00000622260 2098 ntBASIC12.15□□□□□ -0.46
TCRAP04437 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TCRAP04437 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 OR7E14P-202ENST00000530490 1290 ntBASIC12.15□□□□□ -0.46
TCRAP04437 OR7E47P-204ENST00000575924 449 ntBASIC12.15□□□□□ -0.46
TCRAP04437 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
TCRAP04437 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 AL589702.1-201ENST00000641229 1509 ntBASIC12.15□□□□□ -0.46
TCRAP04437 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.15□□□□□ -0.46
TCRAP04437 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TCRAP04437 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.15□□□□□ -0.46
TCRAP04437 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.15□□□□□ -0.47
TCRAP04437 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TCRAP04437 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
TCRAP04437 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRAP04437 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 LINC00528-201ENST00000600723 2160 ntBASIC12.14□□□□□ -0.47
TCRAP04437 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRAP04437 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TCRAP04437 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.14□□□□□ -0.47
TCRAP04437 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 CXCL1P1-201ENST00000502804 216 ntBASIC12.14□□□□□ -0.47
TCRAP04437 KRT18P21-201ENST00000515767 1272 ntBASIC12.14□□□□□ -0.47
TCRAP04437 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.14□□□□□ -0.47
TCRAP04437 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 AL358472.4-201ENST00000633140 710 ntBASIC12.14□□□□□ -0.47
TCRAP04437 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TCRAP04437 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRAP04437 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TCRAP04437 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.14□□□□□ -0.47
TCRAP04437 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms