Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HCN1O60741 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
HCN1O60741 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 AC022532.1-201ENST00000624563 1728 ntBASIC14.95□□□□□ -0.02
HCN1O60741 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HCN1O60741 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 KLF2P3-201ENST00000451977 1087 ntBASIC14.95□□□□□ -0.02
HCN1O60741 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.95□□□□□ -0.02
HCN1O60741 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HCN1O60741 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.95□□□□□ -0.02
HCN1O60741 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.95□□□□□ -0.02
HCN1O60741 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HCN1O60741 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HCN1O60741 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.94□□□□□ -0.02
HCN1O60741 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.94□□□□□ -0.02
HCN1O60741 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 MIR648-201ENST00000385046 94 ntBASIC14.94□□□□□ -0.02
HCN1O60741 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HCN1O60741 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.94□□□□□ -0.02
HCN1O60741 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 RNA5SP421-201ENST00000516864 134 ntBASIC14.94□□□□□ -0.02
HCN1O60741 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.94□□□□□ -0.02
HCN1O60741 AL138918.1-201ENST00000568306 659 ntBASIC14.94□□□□□ -0.02
HCN1O60741 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.94□□□□□ -0.02
HCN1O60741 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.94□□□□□ -0.02
HCN1O60741 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.94□□□□□ -0.02
HCN1O60741 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 AC010491.1-201ENST00000563101 2797 ntBASIC14.94□□□□□ -0.02
HCN1O60741 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
HCN1O60741 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HCN1O60741 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HCN1O60741 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms