Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 AC074044.1-201ENST00000609673 707 ntBASIC15.8■□□□□ 0.12
PCDHGA12O60330 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA12O60330 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA12O60330 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC234783.1-201ENST00000441761 496 ntBASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC015936.2-201ENST00000593177 259 ntBASIC15.79■□□□□ 0.12
PCDHGA12O60330 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC105917.1-201ENST00000506637 2539 ntBASIC15.79■□□□□ 0.12
PCDHGA12O60330 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDHGA12O60330 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDHGA12O60330 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 BOLA2P3-201ENST00000404566 256 ntBASIC15.78■□□□□ 0.12
PCDHGA12O60330 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 AC098850.1-201ENST00000419919 790 ntBASIC15.78■□□□□ 0.12
PCDHGA12O60330 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TIMM17BP1-201ENST00000545713 516 ntBASIC15.78■□□□□ 0.12
PCDHGA12O60330 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 RARRES2P5-201ENST00000564013 466 ntBASIC15.78■□□□□ 0.12
PCDHGA12O60330 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 WFDC1-204ENST00000613603 549 ntBASIC15.78■□□□□ 0.12
PCDHGA12O60330 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGA12O60330 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGA12O60330 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms