Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 MIR4313-201ENST00000580760 101 ntBASIC16.1■□□□□ 0.17
AP3B1O00203 AC022145.2-201ENST00000598203 171 ntBASIC16.1■□□□□ 0.17
AP3B1O00203 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.1■□□□□ 0.17
AP3B1O00203 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.1■□□□□ 0.17
AP3B1O00203 CICP13-201ENST00000422015 2789 ntBASIC16.1■□□□□ 0.17
AP3B1O00203 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
AP3B1O00203 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.1■□□□□ 0.17
AP3B1O00203 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
AP3B1O00203 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
AP3B1O00203 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.09■□□□□ 0.17
AP3B1O00203 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.09■□□□□ 0.17
AP3B1O00203 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.09■□□□□ 0.17
AP3B1O00203 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
AP3B1O00203 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 YBX1P5-201ENST00000509441 847 ntBASIC16.09■□□□□ 0.17
AP3B1O00203 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.09■□□□□ 0.17
AP3B1O00203 MIR3687-2-201ENST00000577708 61 ntBASIC16.09■□□□□ 0.17
AP3B1O00203 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 MIR3687-1-201ENST00000614492 61 ntBASIC16.09■□□□□ 0.17
AP3B1O00203 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 AC090616.6-203ENST00000579186 1945 ntBASIC16.09■□□□□ 0.17
AP3B1O00203 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 AP003680.1-201ENST00000598970 3660 ntBASIC16.09■□□□□ 0.17
AP3B1O00203 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
AP3B1O00203 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
AP3B1O00203 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP3B1O00203 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
AP3B1O00203 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
AP3B1O00203 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
AP3B1O00203 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.08■□□□□ 0.17
AP3B1O00203 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
AP3B1O00203 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
AP3B1O00203 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 AC023157.3-201ENST00000619086 2088 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.08■□□□□ 0.16
AP3B1O00203 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
AP3B1O00203 FO393414.2-201ENST00000405153 598 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.08■□□□□ 0.16
AP3B1O00203 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.08■□□□□ 0.16
AP3B1O00203 AP000344.2-201ENST00000512987 629 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 ALG1L8P-201ENST00000533887 760 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.08■□□□□ 0.16
AP3B1O00203 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.08■□□□□ 0.16
AP3B1O00203 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.08■□□□□ 0.16
AP3B1O00203 AC018529.1-201ENST00000613063 361 ntBASIC16.08■□□□□ 0.16
AP3B1O00203 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms