Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 AL139400.1-201ENST00000366220 510 ntBASIC15.95■□□□□ 0.14
CFAP99D6REC4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 MIR4453-201ENST00000584019 89 ntBASIC15.95■□□□□ 0.14
CFAP99D6REC4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.95■□□□□ 0.14
CFAP99D6REC4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CFAP99D6REC4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CFAP99D6REC4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC004987.2-201ENST00000395959 1148 ntBASIC15.94■□□□□ 0.14
CFAP99D6REC4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 FAM86GP-201ENST00000448322 971 ntBASIC15.94■□□□□ 0.14
CFAP99D6REC4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 Z92544.3-201ENST00000624747 417 ntBASIC15.94■□□□□ 0.14
CFAP99D6REC4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CFAP99D6REC4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CFAP99D6REC4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms