Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC078925.2-201ENST00000624013 1973 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 HAUS4P1-201ENST00000406739 1145 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 C2orf27AP3-201ENST00000434123 579 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 KRT18P43-201ENST00000469825 1281 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC099548.2-209ENST00000480264 625 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC000095.1-201ENST00000603208 874 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 AL354718.3-201ENST00000616414 581 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 CR382287.1-201ENST00000623954 586 ntBASIC15□□□□□ -0.01
CCDC187A0A096LP49 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC187A0A096LP49 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15□□□□□ -0.01
CCDC187A0A096LP49 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 REXO1L8P-201ENST00000604378 1897 ntBASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC106760.1-201ENST00000508690 800 ntBASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 KRT90P-201ENST00000549264 1064 ntBASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 HNRNPUP1-201ENST00000554987 333 ntBASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC187A0A096LP49 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 AL513477.1-201ENST00000602865 2407 ntBASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 REXO1L1P-202ENST00000608646 1974 ntBASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC187A0A096LP49 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms