Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.1■□□□□ 0.17
RAI2Q9Y5P3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PRAL-201ENST00000624952 3286 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 AC022188.1-201ENST00000620960 1664 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 RN7SL692P-201ENST00000464677 288 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 RN7SL618P-201ENST00000477850 296 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 AL512361.1-201ENST00000554200 418 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 AC087499.5-201ENST00000452760 1342 ntBASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAI2Q9Y5P3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.08■□□□□ 0.17
RAI2Q9Y5P3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 COX5BP8-201ENST00000416911 349 ntBASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 ARSEP1-201ENST00000420443 635 ntBASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 TSSK5P-201ENST00000423978 907 ntBASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RAI2Q9Y5P3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms