Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PTP4A1P2-201ENST00000546033 454 ntBASIC16.5■□□□□ 0.23
YIPF1Q9Y548 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 CLUHP6-201ENST00000580789 941 ntBASIC16.5■□□□□ 0.23
YIPF1Q9Y548 AL022328.1-201ENST00000610050 478 ntBASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.5■□□□□ 0.23
YIPF1Q9Y548 PDIA3P1-201ENST00000471856 1510 ntBASIC16.5■□□□□ 0.23
YIPF1Q9Y548 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 BCRP2-202ENST00000447763 634 ntBASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 BCRP6-201ENST00000510112 632 ntBASIC16.49■□□□□ 0.23
YIPF1Q9Y548 BCRP7-201ENST00000511549 544 ntBASIC16.49■□□□□ 0.23
YIPF1Q9Y548 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 AC005252.2-201ENST00000624630 1141 ntBASIC16.49■□□□□ 0.23
YIPF1Q9Y548 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YIPF1Q9Y548 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 AC069224.1-201ENST00000566372 1715 ntBASIC16.48■□□□□ 0.23
YIPF1Q9Y548 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.48■□□□□ 0.23
YIPF1Q9Y548 AL133267.1-201ENST00000398220 340 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms