Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 KRT8P49-201ENST00000604166 1432 ntBASIC14.1□□□□□ -0.15
DUX4Q9UBX2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 PMS2P1-201ENST00000431037 1228 ntBASIC14.1□□□□□ -0.15
DUX4Q9UBX2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 AL031595.1-201ENST00000623969 4709 ntBASIC14.1□□□□□ -0.15
DUX4Q9UBX2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SLC22A20-204ENST00000530038 1673 ntBASIC14.1□□□□□ -0.15
DUX4Q9UBX2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
DUX4Q9UBX2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CXCL1P1-201ENST00000502804 216 ntBASIC14.09□□□□□ -0.15
DUX4Q9UBX2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 AC027601.4-201ENST00000611259 610 ntBASIC14.09□□□□□ -0.15
DUX4Q9UBX2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 TOP3BP1-201ENST00000420768 1380 ntBASIC14.09□□□□□ -0.15
DUX4Q9UBX2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 AL021920.2-201ENST00000624828 1351 ntBASIC14.09□□□□□ -0.15
DUX4Q9UBX2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.09□□□□□ -0.15
DUX4Q9UBX2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUX4Q9UBX2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUX4Q9UBX2 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
DUX4Q9UBX2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.08□□□□□ -0.16
DUX4Q9UBX2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.08□□□□□ -0.16
DUX4Q9UBX2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms