Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.23■□□□□ 0.03
CCM2LQ9NUG4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 AC232323.1-201ENST00000540724 2099 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 REXO1L5P-201ENST00000622260 2098 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 AC254562.1-201ENST00000417586 456 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MCCD1P2-201ENST00000423228 335 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 PI4KAP1-204ENST00000612579 1703 ntBASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCM2LQ9NUG4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 AGAP7P-201ENST00000582299 2062 ntBASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 AGAP14-201ENST00000624701 2060 ntBASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 PTCHD3P3-201ENST00000403073 906 ntBASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 AC011467.4-201ENST00000594891 528 ntBASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 AC106028.4-201ENST00000614509 607 ntBASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCM2LQ9NUG4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.21■□□□□ 0.02
CCM2LQ9NUG4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
CCM2LQ9NUG4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCM2LQ9NUG4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCM2LQ9NUG4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCM2LQ9NUG4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCM2LQ9NUG4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms