Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 KRT8P44-201ENST00000441609 1350 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ZBED1P1-201ENST00000502364 1930 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 AC215219.1-201ENST00000400706 1817 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 AL139327.4-201ENST00000612362 153 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 AC009093.2-202ENST00000620513 2079 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SNHG20-202ENST00000434411 2143 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TSPY26P-201ENST00000476365 1326 ntBASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC8.02□□□□□ -1.13
CDC42SE1Q9NRR8 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC009102.3-201ENST00000623118 1491 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC106788.1-201ENST00000550753 2661 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 PCGF3-213ENST00000620529 1899 ntBASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC8.01□□□□□ -1.13
CDC42SE1Q9NRR8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms