Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 AP001282.1-201ENST00000531301 1499 ntBASIC13.99□□□□□ -0.17
CDH20Q9HBT6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CDH20Q9HBT6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AL513523.2-202ENST00000427283 2040 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AC026691.1-201ENST00000602502 2017 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AC107890.1-201ENST00000422478 521 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 PMS2P2-201ENST00000425039 1128 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AL645939.2-201ENST00000427340 991 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 KLF2P3-201ENST00000451977 1087 ntBASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CDH20Q9HBT6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CDH20Q9HBT6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CDH20Q9HBT6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms