Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 MBLAC2-202ENST00000514906 1936 ntBASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ALOX12P2-203ENST00000570921 1945 ntBASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NDUFAF3Q9BU61 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 CES1P1-201ENST00000421606 1704 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 TUBB8P12-201ENST00000308911 1335 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 TUBB7P-202ENST00000428444 1305 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 TUBB8P7-204ENST00000567960 1332 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 GPR89P-201ENST00000407924 1495 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 KLF4P1-201ENST00000412782 1185 ntBASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.42□□□□□ -0.42
NDUFAF3Q9BU61 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms