Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ALMS1Q8TCU4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC026316.1-201ENST00000398900 414 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 POM121L8P-201ENST00000417732 1281 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 POM121L9P-203ENST00000441984 1285 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 MESTP3-201ENST00000503460 968 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC026410.1-201ENST00000507366 1101 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC078991.1-201ENST00000437297 610 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 KRT8P4-201ENST00000509735 1454 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 AL023803.2-201ENST00000620080 638 ntBASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ALMS1Q8TCU4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 RN7SKP214-201ENST00000364208 315 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC242376.1-201ENST00000559033 726 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC009955.4-201ENST00000597192 544 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC025271.4-201ENST00000621477 1726 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 CYP51A1P3-201ENST00000400072 1428 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 SAMD11P1-201ENST00000571429 661 ntBASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC10.43□□□□□ -0.74
ALMS1Q8TCU4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms