Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB3IL1Q8TBN0 AC126335.2-201ENST00000623362 4637 ntBASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 FGFR3P6-201ENST00000457012 610 ntBASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 SCARNA2-201ENST00000458748 420 ntBASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 MIR4515-201ENST00000584082 81 ntBASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB3IL1Q8TBN0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IL1Q8TBN0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IL1Q8TBN0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAB3IL1Q8TBN0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.96■□□□□ 0.14
RAB3IL1Q8TBN0 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RAB3IL1Q8TBN0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AC112693.3-201ENST00000624819 1983 ntBASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 CICP24-201ENST00000605464 2705 ntBASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.95■□□□□ 0.14
RAB3IL1Q8TBN0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RAB3IL1Q8TBN0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms