Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 MIR1909-201ENST00000411312 80 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 ACTG1P3-201ENST00000431775 1114 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 AC022210.1-201ENST00000449856 793 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 CROCCP4-201ENST00000457096 498 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 AC120045.2-201ENST00000567334 178 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 BTNL10-201ENST00000595971 695 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.03■□□□□ 0.32
SMG8Q8ND04 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
SMG8Q8ND04 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMG8Q8ND04 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AC119751.2-201ENST00000504529 210 ntBASIC17.02■□□□□ 0.32
SMG8Q8ND04 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.02■□□□□ 0.32
SMG8Q8ND04 MIR4259-201ENST00000584466 101 ntBASIC17.02■□□□□ 0.32
SMG8Q8ND04 MIR6752-201ENST00000618442 71 ntBASIC17.02■□□□□ 0.32
SMG8Q8ND04 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMG8Q8ND04 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SMG8Q8ND04 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMG8Q8ND04 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
SMG8Q8ND04 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SMG8Q8ND04 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SMG8Q8ND04 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 AC112504.1-201ENST00000623415 1841 ntBASIC17.01■□□□□ 0.31
SMG8Q8ND04 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.01■□□□□ 0.31
SMG8Q8ND04 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 RPL13AP25-201ENST00000484130 612 ntBASIC17.01■□□□□ 0.31
SMG8Q8ND04 SLC25A47P1-201ENST00000531577 414 ntBASIC17.01■□□□□ 0.31
SMG8Q8ND04 SNX29P1-201ENST00000548357 1007 ntBASIC17.01■□□□□ 0.31
SMG8Q8ND04 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMG8Q8ND04 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.01■□□□□ 0.31
SMG8Q8ND04 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17■□□□□ 0.31
SMG8Q8ND04 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SMG8Q8ND04 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17■□□□□ 0.31
SMG8Q8ND04 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMG8Q8ND04 MIR658-201ENST00000385210 100 ntBASIC17■□□□□ 0.31
SMG8Q8ND04 C1QBPP1-201ENST00000400117 770 ntBASIC17■□□□□ 0.31
SMG8Q8ND04 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms