Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 AC011840.4-201ENST00000578471 627 ntBASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CROCCP3Q8IVE0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AL441883.1-201ENST00000566170 1045 ntBASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AC005336.2-201ENST00000593183 939 ntBASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AL590326.2-201ENST00000625139 305 ntBASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 AC126365.1-201ENST00000578585 1514 ntBASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 SNX33P1-201ENST00000592116 1762 ntBASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CROCCP3Q8IVE0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CROCCP3Q8IVE0 AC005562.1-201ENST00000583030 3219 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms