Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 AC138969.2-201ENST00000532739 9932 ntBASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CHMP1BQ7LBR1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 SLC25A39P2-201ENST00000537614 270 ntBASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 AP000842.3-202ENST00000569238 1080 ntBASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CHMP1BQ7LBR1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 AC093520.2-201ENST00000561830 333 ntBASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 LINC01225-203ENST00000563550 1244 ntBASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 AC078925.2-201ENST00000624013 1973 ntBASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CHMP1BQ7LBR1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 OR2I1P-210ENST00000642037 4691 ntBASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHMP1BQ7LBR1 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms