Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 KRT18P25-201ENST00000508931 1278 ntBASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 AC024681.1-201ENST00000521917 487 ntBASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 AC005357.2-202ENST00000590507 1060 ntBASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RSPO4Q2I0M5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 AL627389.1-201ENST00000413508 1182 ntBASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 KRT18P64-201ENST00000434946 1219 ntBASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 AC234782.1-201ENST00000451950 919 ntBASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RSPO4Q2I0M5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 RN7SL8P-201ENST00000461771 266 ntBASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.27■□□□□ 0.04
RSPO4Q2I0M5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RSPO4Q2I0M5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms