Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL161773.1-201ENST00000624845 863 ntBASIC20.83■□□□□ 0.93
COL16A1Q07092 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.83■□□□□ 0.93
COL16A1Q07092 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.83■□□□□ 0.93
COL16A1Q07092 CLUHP2-201ENST00000426660 1303 ntBASIC20.83■□□□□ 0.93
COL16A1Q07092 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
COL16A1Q07092 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL16A1Q07092 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
COL16A1Q07092 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
COL16A1Q07092 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL16A1Q07092 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL16A1Q07092 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.83■□□□□ 0.92
COL16A1Q07092 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 AL512430.1-201ENST00000392575 860 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.82■□□□□ 0.92
COL16A1Q07092 AC018463.1-201ENST00000456674 917 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 MIR4683-201ENST00000579659 81 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
COL16A1Q07092 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
COL16A1Q07092 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 AL158070.2-201ENST00000623713 1621 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.82■□□□□ 0.92
COL16A1Q07092 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.82■□□□□ 0.92
COL16A1Q07092 PUDPP3-201ENST00000445368 636 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.82■□□□□ 0.92
COL16A1Q07092 TPM1-223ENST00000560445 485 ntTSL 3 BASIC20.82■□□□□ 0.92
COL16A1Q07092 AC103810.10-201ENST00000606504 343 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 AC073911.3-201ENST00000624401 631 ntBASIC20.82■□□□□ 0.92
COL16A1Q07092 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
COL16A1Q07092 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
COL16A1Q07092 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 AC022188.1-201ENST00000620960 1664 ntBASIC20.81■□□□□ 0.92
COL16A1Q07092 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.81■□□□□ 0.92
COL16A1Q07092 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.81■□□□□ 0.92
COL16A1Q07092 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.81■□□□□ 0.92
COL16A1Q07092 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
COL16A1Q07092 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
COL16A1Q07092 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.81■□□□□ 0.92
COL16A1Q07092 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.81■□□□□ 0.92
COL16A1Q07092 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC20.81■□□□□ 0.92
COL16A1Q07092 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.81■□□□□ 0.92
COL16A1Q07092 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC20.81■□□□□ 0.92
COL16A1Q07092 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC20.81■□□□□ 0.92
COL16A1Q07092 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
COL16A1Q07092 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
COL16A1Q07092 AC078925.2-201ENST00000624013 1973 ntBASIC20.81■□□□□ 0.92
COL16A1Q07092 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.81■□□□□ 0.92
COL16A1Q07092 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL16A1Q07092 RN7SKP175-201ENST00000408472 289 ntBASIC20.8■□□□□ 0.92
COL16A1Q07092 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.8■□□□□ 0.92
COL16A1Q07092 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.8■□□□□ 0.92
COL16A1Q07092 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.8■□□□□ 0.92
COL16A1Q07092 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.8■□□□□ 0.92
COL16A1Q07092 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL16A1Q07092 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.8■□□□□ 0.92
COL16A1Q07092 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC20.8■□□□□ 0.92
COL16A1Q07092 C2orf69P1-201ENST00000563532 1093 ntBASIC20.8■□□□□ 0.92
COL16A1Q07092 MIR5196-201ENST00000578146 115 ntBASIC20.8■□□□□ 0.92
COL16A1Q07092 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.8■□□□□ 0.92
COL16A1Q07092 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.8■□□□□ 0.92
COL16A1Q07092 AC005618.3-201ENST00000624928 458 ntBASIC20.8■□□□□ 0.92
COL16A1Q07092 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.8■□□□□ 0.92
COL16A1Q07092 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL16A1Q07092 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL16A1Q07092 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms