Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 HYMAI-201ENST00000635591 3347 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.38□□□□□ -0.11
RPS4XP62701 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.38□□□□□ -0.11
RPS4XP62701 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.38□□□□□ -0.11
RPS4XP62701 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.38□□□□□ -0.11
RPS4XP62701 MIR4745-201ENST00000577608 62 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 MIR4313-201ENST00000580760 101 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 AP001059.3-201ENST00000619053 235 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 AC092127.1-201ENST00000567093 3455 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 AC023157.3-201ENST00000619086 2088 ntBASIC14.38□□□□□ -0.11
RPS4XP62701 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.38□□□□□ -0.11
RPS4XP62701 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RPS4XP62701 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.38□□□□□ -0.11
RPS4XP62701 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RPS4XP62701 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 AC006486.2-201ENST00000624246 2199 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS4XP62701 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RPS4XP62701 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 BASP1P1-201ENST00000430708 665 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 RBPMS2P1-201ENST00000437762 623 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 COX20P2-201ENST00000452636 358 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 AL139010.1-201ENST00000454878 894 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 AL512356.2-201ENST00000546955 174 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 AL109954.1-202ENST00000564051 2148 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 AJ011932.1-201ENST00000621707 465 ntBASIC14.37□□□□□ -0.11
RPS4XP62701 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.37□□□□□ -0.11
RPS4XP62701 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RPS4XP62701 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.37□□□□□ -0.11
RPS4XP62701 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.37□□□□□ -0.11
RPS4XP62701 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RPS4XP62701 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms