Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 FAM201B-201ENST00000458407 597 ntBASIC14.34□□□□□ -0.11
VBP1P61758 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.34□□□□□ -0.11
VBP1P61758 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 BX640514.1-201ENST00000583223 1918 ntBASIC14.34□□□□□ -0.11
VBP1P61758 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
VBP1P61758 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 AC136759.1-202ENST00000530858 2194 ntBASIC14.34□□□□□ -0.11
VBP1P61758 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.34□□□□□ -0.11
VBP1P61758 AC023024.2-201ENST00000623561 1993 ntBASIC14.34□□□□□ -0.11
VBP1P61758 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VBP1P61758 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.34□□□□□ -0.11
VBP1P61758 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
VBP1P61758 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VBP1P61758 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
VBP1P61758 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
VBP1P61758 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.33□□□□□ -0.11
VBP1P61758 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VBP1P61758 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VBP1P61758 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
VBP1P61758 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
VBP1P61758 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.33□□□□□ -0.11
VBP1P61758 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.33□□□□□ -0.11
VBP1P61758 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VBP1P61758 TP73-AS1-210ENST00000637775 1455 ntBASIC14.33□□□□□ -0.12
VBP1P61758 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VBP1P61758 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 GCSHP5-201ENST00000443090 522 ntBASIC14.33□□□□□ -0.12
VBP1P61758 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.33□□□□□ -0.12
VBP1P61758 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.33□□□□□ -0.12
VBP1P61758 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
VBP1P61758 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
VBP1P61758 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 LINC01568-207ENST00000641790 1380 ntBASIC14.33□□□□□ -0.12
VBP1P61758 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VBP1P61758 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VBP1P61758 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 NCF1C-201ENST00000438382 1427 ntBASIC14.32□□□□□ -0.12
VBP1P61758 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.32□□□□□ -0.12
VBP1P61758 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.32□□□□□ -0.12
VBP1P61758 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
VBP1P61758 CICP17-201ENST00000418553 2377 ntBASIC14.32□□□□□ -0.12
VBP1P61758 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.32□□□□□ -0.12
VBP1P61758 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VBP1P61758 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms