Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 AC069148.1-201ENST00000608741 768 ntBASIC12.47□□□□□ -0.41
ERVFC1-1P60608 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 GPAA1P2-202ENST00000606848 1787 ntBASIC12.47□□□□□ -0.41
ERVFC1-1P60608 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 AL139385.1-201ENST00000611744 3272 ntBASIC12.47□□□□□ -0.41
ERVFC1-1P60608 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 PEG13-201ENST00000631594 5667 ntBASIC12.47□□□□□ -0.41
ERVFC1-1P60608 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ERVFC1-1P60608 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.46□□□□□ -0.41
ERVFC1-1P60608 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ERVFC1-1P60608 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC12.46□□□□□ -0.42
ERVFC1-1P60608 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 DGCR9-201ENST00000609630 2415 ntBASIC12.46□□□□□ -0.42
ERVFC1-1P60608 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ERVFC1-1P60608 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ERVFC1-1P60608 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms