Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 DBET-201ENST00000630918 3363 ntBASIC17.04■□□□□ 0.32
RAD23BP54727 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 MIR943-201ENST00000401286 94 ntBASIC17.04■□□□□ 0.32
RAD23BP54727 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD23BP54727 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD23BP54727 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 AL158211.3-201ENST00000607385 239 ntBASIC17.04■□□□□ 0.32
RAD23BP54727 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 TEX28P1-201ENST00000613479 1221 ntBASIC17.04■□□□□ 0.32
RAD23BP54727 TEX28P2-201ENST00000617764 1221 ntBASIC17.04■□□□□ 0.32
RAD23BP54727 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.04■□□□□ 0.32
RAD23BP54727 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAD23BP54727 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.04■□□□□ 0.32
RAD23BP54727 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RAD23BP54727 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RAD23BP54727 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAD23BP54727 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAD23BP54727 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 AZGP1P1-201ENST00000411909 902 ntBASIC17.03■□□□□ 0.32
RAD23BP54727 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD23BP54727 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
RAD23BP54727 AC027369.6-201ENST00000525520 931 ntBASIC17.03■□□□□ 0.32
RAD23BP54727 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.03■□□□□ 0.32
RAD23BP54727 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 AL390955.2-201ENST00000603032 514 ntBASIC17.03■□□□□ 0.32
RAD23BP54727 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.03■□□□□ 0.32
RAD23BP54727 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.03■□□□□ 0.32
RAD23BP54727 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAD23BP54727 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAD23BP54727 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAD23BP54727 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
RAD23BP54727 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAD23BP54727 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD23BP54727 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 NFIC-211ENST00000641145 8399 ntBASIC17.02■□□□□ 0.32
RAD23BP54727 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.02■□□□□ 0.32
RAD23BP54727 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 CYMP-203ENST00000474680 1263 ntBASIC17.02■□□□□ 0.32
RAD23BP54727 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD23BP54727 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.02■□□□□ 0.32
RAD23BP54727 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.02■□□□□ 0.32
RAD23BP54727 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.02■□□□□ 0.32
RAD23BP54727 AC027796.2-201ENST00000575326 344 ntBASIC17.02■□□□□ 0.32
RAD23BP54727 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.02■□□□□ 0.32
RAD23BP54727 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.02■□□□□ 0.32
RAD23BP54727 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAD23BP54727 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.02■□□□□ 0.32
RAD23BP54727 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAD23BP54727 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms