Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.69■□□□□ 0.1
LIMK1P53667 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.69■□□□□ 0.1
LIMK1P53667 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LIMK1P53667 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 Z97205.2-201ENST00000564697 1639 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 AC006277.1-201ENST00000624348 1610 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 LINC02012-201ENST00000608206 1725 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
LIMK1P53667 OR6D1P-202ENST00000641007 5290 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LIMK1P53667 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
LIMK1P53667 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.68■□□□□ 0.1
LIMK1P53667 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
LIMK1P53667 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.68■□□□□ 0.1
LIMK1P53667 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 AC009486.1-201ENST00000569860 813 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.68■□□□□ 0.1
LIMK1P53667 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.68■□□□□ 0.1
LIMK1P53667 AL158212.4-201ENST00000624062 1286 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 AC244452.3-201ENST00000636814 210 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
LIMK1P53667 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 PKD1P1-201ENST00000458669 6805 ntBASIC15.68■□□□□ 0.1
LIMK1P53667 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.68■□□□□ 0.1
LIMK1P53667 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LIMK1P53667 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LIMK1P53667 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LIMK1P53667 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.67■□□□□ 0.1
LIMK1P53667 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.67■□□□□ 0.1
LIMK1P53667 HIST3H2BA-201ENST00000436555 524 ntBASIC15.67■□□□□ 0.1
LIMK1P53667 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LIMK1P53667 FTH1P14-201ENST00000482930 551 ntBASIC15.67■□□□□ 0.1
LIMK1P53667 FAM86HP-204ENST00000513466 959 ntBASIC15.67■□□□□ 0.1
LIMK1P53667 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.67■□□□□ 0.1
LIMK1P53667 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.67■□□□□ 0.1
LIMK1P53667 AL359711.2-201ENST00000563105 872 ntBASIC15.67■□□□□ 0.1
LIMK1P53667 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.67■□□□□ 0.1
LIMK1P53667 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.67■□□□□ 0.1
LIMK1P53667 AC016629.1-201ENST00000596579 586 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms