Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
PDE6CP51160 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDE6CP51160 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 AC011477.6-201ENST00000604980 1927 ntBASIC17.25■□□□□ 0.35
PDE6CP51160 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDE6CP51160 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 MIR943-201ENST00000401286 94 ntBASIC17.25■□□□□ 0.35
PDE6CP51160 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6CP51160 BCRP1-201ENST00000444246 691 ntBASIC17.25■□□□□ 0.35
PDE6CP51160 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.25■□□□□ 0.35
PDE6CP51160 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6CP51160 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 AC005498.2-205ENST00000593218 784 ntBASIC17.25■□□□□ 0.35
PDE6CP51160 AL158211.3-201ENST00000607385 239 ntBASIC17.25■□□□□ 0.35
PDE6CP51160 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.25■□□□□ 0.35
PDE6CP51160 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.25■□□□□ 0.35
PDE6CP51160 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PDE6CP51160 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDE6CP51160 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 AC134407.2-201ENST00000625089 1978 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PDE6CP51160 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 HLA-H-201ENST00000383620 1096 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6CP51160 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 AC055876.3-201ENST00000431496 288 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 AC093214.1-201ENST00000511688 1107 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 AC069120.2-201ENST00000524091 540 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 DUX4L27-201ENST00000554796 1261 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.24■□□□□ 0.35
PDE6CP51160 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.24■□□□□ 0.35
PDE6CP51160 AC138649.4-201ENST00000612222 287 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.24■□□□□ 0.35
PDE6CP51160 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.24■□□□□ 0.35
PDE6CP51160 AJ011932.1-201ENST00000621707 465 ntBASIC17.24■□□□□ 0.35
PDE6CP51160 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.24■□□□□ 0.35
PDE6CP51160 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDE6CP51160 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDE6CP51160 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
PDE6CP51160 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.23■□□□□ 0.35
PDE6CP51160 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PDE6CP51160 FAM220BP-201ENST00000377689 816 ntBASIC17.23■□□□□ 0.35
PDE6CP51160 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.23■□□□□ 0.35
PDE6CP51160 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.23■□□□□ 0.35
PDE6CP51160 RARRES2P9-201ENST00000565168 469 ntBASIC17.23■□□□□ 0.35
PDE6CP51160 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.23■□□□□ 0.35
PDE6CP51160 LINC02084-201ENST00000606069 1096 ntBASIC17.23■□□□□ 0.35
PDE6CP51160 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms