Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
KRT2P35908 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT2P35908 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT2P35908 AC069120.2-201ENST00000524091 540 ntBASIC18.23■□□□□ 0.51
KRT2P35908 AC140878.1-201ENST00000565277 250 ntBASIC18.23■□□□□ 0.51
KRT2P35908 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT2P35908 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT2P35908 AC073592.8-201ENST00000624126 511 ntBASIC18.23■□□□□ 0.51
KRT2P35908 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT2P35908 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT2P35908 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT2P35908 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT2P35908 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT2P35908 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
KRT2P35908 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 AL607033.1-201ENST00000623900 1599 ntBASIC18.22■□□□□ 0.51
KRT2P35908 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KRT2P35908 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 SERBP1P3-201ENST00000459980 809 ntBASIC18.22■□□□□ 0.51
KRT2P35908 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT2P35908 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.22■□□□□ 0.51
KRT2P35908 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.22■□□□□ 0.51
KRT2P35908 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 TEX28P1-201ENST00000613479 1221 ntBASIC18.22■□□□□ 0.51
KRT2P35908 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.22■□□□□ 0.51
KRT2P35908 TEX28P2-201ENST00000617764 1221 ntBASIC18.22■□□□□ 0.51
KRT2P35908 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT2P35908 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT2P35908 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 AC020658.6-201ENST00000623564 1870 ntBASIC18.22■□□□□ 0.51
KRT2P35908 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT2P35908 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.22■□□□□ 0.51
KRT2P35908 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT2P35908 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT2P35908 AL139384.1-201ENST00000612143 3047 ntBASIC18.21■□□□□ 0.51
KRT2P35908 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
KRT2P35908 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT2P35908 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT2P35908 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
KRT2P35908 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT2P35908 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT2P35908 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT2P35908 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT2P35908 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.21■□□□□ 0.51
KRT2P35908 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.21■□□□□ 0.51
KRT2P35908 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms