Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
CFTRP13569 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC26.55■■□□□ 1.84
CFTRP13569 AC114501.1-201ENST00000445949 172 ntBASIC26.55■■□□□ 1.84
CFTRP13569 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CFTRP13569 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC26.55■■□□□ 1.84
CFTRP13569 AC242376.1-201ENST00000559033 726 ntBASIC26.55■■□□□ 1.84
CFTRP13569 EID1-202ENST00000560490 584 ntTSL 3 BASIC26.55■■□□□ 1.84
CFTRP13569 AC138466.3-201ENST00000619983 221 ntBASIC26.55■■□□□ 1.84
CFTRP13569 AL162426.1-201ENST00000624141 743 ntBASIC26.55■■□□□ 1.84
CFTRP13569 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CFTRP13569 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC26.55■■□□□ 1.84
CFTRP13569 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CFTRP13569 RNMTL1P1-201ENST00000454103 560 ntBASIC26.55■■□□□ 1.84
CFTRP13569 MIR4754-201ENST00000582477 89 ntBASIC26.55■■□□□ 1.84
CFTRP13569 AC020922.3-201ENST00000595064 547 ntBASIC26.55■■□□□ 1.84
CFTRP13569 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC26.54■■□□□ 1.84
CFTRP13569 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CFTRP13569 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC26.54■■□□□ 1.84
CFTRP13569 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC26.54■■□□□ 1.84
CFTRP13569 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CFTRP13569 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC26.54■■□□□ 1.84
CFTRP13569 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC26.54■■□□□ 1.84
CFTRP13569 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 ISCA2P1-201ENST00000425548 448 ntBASIC26.54■■□□□ 1.84
CFTRP13569 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CFTRP13569 AL160314.3-201ENST00000556041 767 ntBASIC26.54■■□□□ 1.84
CFTRP13569 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 AL645728.2-202ENST00000641679 227 ntBASIC26.54■■□□□ 1.84
CFTRP13569 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CFTRP13569 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CFTRP13569 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
CFTRP13569 CLUHP2-201ENST00000426660 1303 ntBASIC26.53■■□□□ 1.84
CFTRP13569 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFTRP13569 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC26.53■■□□□ 1.84
CFTRP13569 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CFTRP13569 AC098935.1-201ENST00000446057 611 ntBASIC26.53■■□□□ 1.84
CFTRP13569 RN7SL736P-201ENST00000613111 269 ntBASIC26.53■■□□□ 1.84
CFTRP13569 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC26.53■■□□□ 1.84
CFTRP13569 AC004899.1-201ENST00000424687 1714 ntBASIC26.53■■□□□ 1.84
CFTRP13569 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CFTRP13569 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CFTRP13569 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC26.53■■□□□ 1.84
CFTRP13569 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CFTRP13569 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFTRP13569 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFTRP13569 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CFTRP13569 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC26.52■■□□□ 1.84
CFTRP13569 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC26.52■■□□□ 1.84
CFTRP13569 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFTRP13569 AC004923.1-202ENST00000642106 209 ntBASIC26.52■■□□□ 1.84
CFTRP13569 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CFTRP13569 AL133373.2-201ENST00000623187 2828 ntBASIC26.52■■□□□ 1.84
CFTRP13569 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CFTRP13569 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
CFTRP13569 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC26.52■■□□□ 1.84
CFTRP13569 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC26.51■■□□□ 1.83
CFTRP13569 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 RPSAP31-201ENST00000416648 895 ntBASIC26.51■■□□□ 1.83
CFTRP13569 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC26.51■■□□□ 1.83
CFTRP13569 AC006335.1-201ENST00000445200 547 ntBASIC26.51■■□□□ 1.83
CFTRP13569 KRT18P66-201ENST00000452970 1269 ntBASIC26.51■■□□□ 1.83
CFTRP13569 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC26.51■■□□□ 1.83
CFTRP13569 AC006453.1-201ENST00000636037 1257 ntBASIC26.51■■□□□ 1.83
CFTRP13569 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CFTRP13569 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 GHSR-202ENST00000427970 912 ntBASIC26.5■■□□□ 1.83
CFTRP13569 WDR7-208ENST00000589935 544 ntTSL 4 BASIC26.5■■□□□ 1.83
CFTRP13569 AC004466.1-201ENST00000599515 1080 ntBASIC26.5■■□□□ 1.83
CFTRP13569 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC26.5■■□□□ 1.83
CFTRP13569 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC26.5■■□□□ 1.83
CFTRP13569 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CFTRP13569 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
CFTRP13569 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms