Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 AL844908.2-201ENST00000609461 460 ntBASIC17.46■□□□□ 0.39
CLTAP09496 AL033527.5-202ENST00000641632 1098 ntBASIC17.46■□□□□ 0.39
CLTAP09496 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLTAP09496 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CLTAP09496 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.46■□□□□ 0.39
CLTAP09496 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLTAP09496 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.46■□□□□ 0.38
CLTAP09496 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CLTAP09496 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
CLTAP09496 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CLTAP09496 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CLTAP09496 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLTAP09496 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CLTAP09496 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 AC105917.1-201ENST00000506637 2539 ntBASIC17.45■□□□□ 0.38
CLTAP09496 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 FO393414.2-201ENST00000405153 598 ntBASIC17.45■□□□□ 0.38
CLTAP09496 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.45■□□□□ 0.38
CLTAP09496 AC009477.1-201ENST00000452936 217 ntBASIC17.45■□□□□ 0.38
CLTAP09496 RN7SL618P-201ENST00000477850 296 ntBASIC17.45■□□□□ 0.38
CLTAP09496 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.45■□□□□ 0.38
CLTAP09496 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.45■□□□□ 0.38
CLTAP09496 AC092364.2-202ENST00000597012 1073 ntBASIC17.45■□□□□ 0.38
CLTAP09496 MIR6069-201ENST00000620069 79 ntBASIC17.45■□□□□ 0.38
CLTAP09496 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CLTAP09496 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CLTAP09496 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CLTAP09496 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CLTAP09496 AC022144.1-201ENST00000602255 1580 ntBASIC17.45■□□□□ 0.38
CLTAP09496 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CLTAP09496 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.44■□□□□ 0.38
CLTAP09496 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLTAP09496 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CLTAP09496 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 EEF1DP4-201ENST00000446006 880 ntBASIC17.44■□□□□ 0.38
CLTAP09496 UGT1A2P-201ENST00000454886 866 ntBASIC17.44■□□□□ 0.38
CLTAP09496 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 AL512361.1-201ENST00000554200 418 ntBASIC17.44■□□□□ 0.38
CLTAP09496 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.44■□□□□ 0.38
CLTAP09496 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.44■□□□□ 0.38
CLTAP09496 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CLTAP09496 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CLTAP09496 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CLTAP09496 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CLTAP09496 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms