Protein–RNA interactions for Protein: P04553

PRM1, Sperm protamine P1, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRM1P04553 DUX4L8-201ENST00000629013 1275 ntBASIC3.82□□□□□ -1.8
PRM1P04553 DUX4L3-201ENST00000630187 1275 ntBASIC3.82□□□□□ -1.8
PRM1P04553 BRD4-212ENST00000630599 726 ntTSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 DUX4L7-201ENST00000630678 1275 ntBASIC3.82□□□□□ -1.8
PRM1P04553 DUX4L5-201ENST00000630834 1275 ntBASIC3.82□□□□□ -1.8
PRM1P04553 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
PRM1P04553 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 AL031719.1-201ENST00000623365 2587 ntBASIC3.82□□□□□ -1.8
PRM1P04553 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC3.82□□□□□ -1.8
PRM1P04553 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 PPP1R26P1-201ENST00000474415 3613 ntBASIC3.82□□□□□ -1.8
PRM1P04553 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 AP002008.2-201ENST00000635926 4870 ntBASIC3.82□□□□□ -1.8
PRM1P04553 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PRM1P04553 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 AC090616.6-203ENST00000579186 1945 ntBASIC3.82□□□□□ -1.8
PRM1P04553 AC011477.6-201ENST00000604980 1927 ntBASIC3.82□□□□□ -1.8
PRM1P04553 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC3.82□□□□□ -1.8
PRM1P04553 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRM1P04553 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC3.81□□□□□ -1.8
PRM1P04553 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC3.81□□□□□ -1.8
PRM1P04553 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
PRM1P04553 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 AL512791.2-201ENST00000615251 4609 ntBASIC3.81□□□□□ -1.8
PRM1P04553 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PRM1P04553 AL163051.1-201ENST00000569214 1512 ntBASIC3.81□□□□□ -1.8
PRM1P04553 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PRM1P04553 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms