Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 LINC01230-201ENST00000625222 3017 ntBASIC10.39□□□□□ -0.75
TRACP01848 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.39□□□□□ -0.75
TRACP01848 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 AL353593.2-201ENST00000602529 1483 ntBASIC10.39□□□□□ -0.75
TRACP01848 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 FAM8A3P-201ENST00000427218 844 ntBASIC10.39□□□□□ -0.75
TRACP01848 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC10.39□□□□□ -0.75
TRACP01848 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.39□□□□□ -0.75
TRACP01848 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC10.39□□□□□ -0.75
TRACP01848 RPS15-203ENST00000586096 570 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 USF2-205ENST00000594064 1179 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
TRACP01848 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
TRACP01848 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
TRACP01848 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 PC-214ENST00000628663 1470 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.38□□□□□ -0.75
TRACP01848 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
TRACP01848 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
TRACP01848 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms