Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CEND1P1-201ENST00000451006 455 ntBASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC079140.1-201ENST00000508039 487 ntBASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC243562.1-201ENST00000560672 389 ntBASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AL138918.1-201ENST00000568306 659 ntBASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
HLA-DRB4X5D2U9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 TNRC18P2-201ENST00000417666 2714 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 GPX1P2-201ENST00000429271 606 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SPCS2P4-201ENST00000436160 681 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 YBX1P5-201ENST00000509441 847 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 KRT8P48-201ENST00000515599 1220 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AC024267.1-201ENST00000582320 895 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SPTSSB-204ENST00000617024 1292 ntBASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HLA-DRB4X5D2U9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms