Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 AC100757.3-201ENST00000622361 1406 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 HIST3H2BA-201ENST00000436555 524 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ATP5G2P4-201ENST00000442175 420 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 PHKG1P2-201ENST00000457537 863 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SERBP1P3-201ENST00000459980 809 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 AL590560.3-201ENST00000623350 461 ntBASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAI2Q9Y5P3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AC241585.1-201ENST00000433527 519 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AL450472.2-201ENST00000603663 1156 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AL662799.1-202ENST00000614205 422 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 MIR6069-201ENST00000620069 79 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AL033527.5-202ENST00000641632 1098 ntBASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAI2Q9Y5P3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms