Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
YME1L1Q96TA2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 PHKG1P2-201ENST00000457537 863 ntBASIC17.01■□□□□ 0.31
YME1L1Q96TA2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.01■□□□□ 0.31
YME1L1Q96TA2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
YME1L1Q96TA2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17■□□□□ 0.31
YME1L1Q96TA2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17■□□□□ 0.31
YME1L1Q96TA2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17■□□□□ 0.31
YME1L1Q96TA2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17■□□□□ 0.31
YME1L1Q96TA2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17■□□□□ 0.31
YME1L1Q96TA2 AC008687.7-202ENST00000637404 953 ntBASIC17■□□□□ 0.31
YME1L1Q96TA2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
YME1L1Q96TA2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17■□□□□ 0.31
YME1L1Q96TA2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17■□□□□ 0.31
YME1L1Q96TA2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17■□□□□ 0.31
YME1L1Q96TA2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 REXO1L8P-201ENST00000604378 1897 ntBASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 RNF216P1-203ENST00000404404 2427 ntBASIC16.99■□□□□ 0.31
YME1L1Q96TA2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
YME1L1Q96TA2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms