Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 FO393414.2-201ENST00000405153 598 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AC136604.1-201ENST00000418535 575 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AC114501.2-201ENST00000439631 535 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 RN7SL837P-201ENST00000463010 287 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 CHCHD2P3-201ENST00000603038 451 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AC007431.3-201ENST00000623221 587 ntBASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX2-3Q8TAU0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 AC092127.1-201ENST00000567093 3455 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 AC092850.2-201ENST00000623821 2697 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 SPDYE19P-201ENST00000338590 713 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 RPL13P2-201ENST00000440687 659 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 AL450472.2-201ENST00000603663 1156 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX2-3Q8TAU0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 AC092933.1-201ENST00000393644 945 ntBASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 WASH4P-201ENST00000564273 1246 ntBASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 MIR4259-201ENST00000584466 101 ntBASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX2-3Q8TAU0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX2-3Q8TAU0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms