Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 AC126335.2-201ENST00000623362 4637 ntBASIC11.98□□□□□ -0.49
NUP35Q8NFH5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.98□□□□□ -0.49
NUP35Q8NFH5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 BX664615.1-201ENST00000443558 458 ntBASIC11.97□□□□□ -0.49
NUP35Q8NFH5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AP005901.3-202ENST00000581653 237 ntBASIC11.97□□□□□ -0.49
NUP35Q8NFH5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 LINC01023-201ENST00000606054 436 ntBASIC11.97□□□□□ -0.49
NUP35Q8NFH5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
NUP35Q8NFH5 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 AL645929.1-201ENST00000420084 975 ntBASIC11.96□□□□□ -0.49
NUP35Q8NFH5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.96□□□□□ -0.49
NUP35Q8NFH5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms