Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 AC091167.2-201ENST00000579581 588 ntBASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 AC138761.1-201ENST00000584393 385 ntBASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCNI2Q6ZMN8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AL139400.1-201ENST00000366220 510 ntBASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 MIR4751-201ENST00000578027 74 ntBASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AL589182.2-201ENST00000619332 1049 ntBASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 AC007191.1-201ENST00000623179 2995 ntBASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SLC22A20-204ENST00000530038 1673 ntBASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCNI2Q6ZMN8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 AC091951.1-201ENST00000512854 2465 ntBASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 AC090616.6-203ENST00000579186 1945 ntBASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 NORAD-201ENST00000565493 5339 ntBASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 AP000344.2-201ENST00000512987 629 ntBASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCNI2Q6ZMN8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms