Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SGO1Q5FBB7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 AC098859.1-201ENST00000502915 1238 ntBASIC15.56■□□□□ 0.08
SGO1Q5FBB7 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.56■□□□□ 0.08
SGO1Q5FBB7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SGO1Q5FBB7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.55■□□□□ 0.08
SGO1Q5FBB7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AC245100.5-201ENST00000452108 331 ntBASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 AC068418.2-201ENST00000577309 3703 ntBASIC15.55■□□□□ 0.08
SGO1Q5FBB7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SGO1Q5FBB7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.55■□□□□ 0.08
SGO1Q5FBB7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SGO1Q5FBB7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms