Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SRPXP78539 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SRPXP78539 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SRPXP78539 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
SRPXP78539 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SRPXP78539 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.2□□□□□ -0.3
SRPXP78539 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SRPXP78539 AC211429.1-201ENST00000415277 523 ntBASIC13.19□□□□□ -0.3
SRPXP78539 PCED1CP-201ENST00000419887 785 ntBASIC13.19□□□□□ -0.3
SRPXP78539 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 RN7SL850P-201ENST00000579959 291 ntBASIC13.19□□□□□ -0.3
SRPXP78539 MIR4321-201ENST00000592276 80 ntBASIC13.19□□□□□ -0.3
SRPXP78539 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SRPXP78539 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 KRT8P44-201ENST00000441609 1350 ntBASIC13.19□□□□□ -0.3
SRPXP78539 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.19□□□□□ -0.3
SRPXP78539 AC087386.2-201ENST00000623212 4637 ntBASIC13.19□□□□□ -0.3
SRPXP78539 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.19□□□□□ -0.3
SRPXP78539 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SRPXP78539 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.18□□□□□ -0.3
SRPXP78539 AC232323.1-201ENST00000540724 2099 ntBASIC13.18□□□□□ -0.3
SRPXP78539 AGAP7P-201ENST00000582299 2062 ntBASIC13.18□□□□□ -0.3
SRPXP78539 REXO1L5P-201ENST00000622260 2098 ntBASIC13.18□□□□□ -0.3
SRPXP78539 AGAP14-201ENST00000624701 2060 ntBASIC13.18□□□□□ -0.3
SRPXP78539 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SRPXP78539 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.18□□□□□ -0.3
SRPXP78539 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.18□□□□□ -0.3
SRPXP78539 AC008667.4-201ENST00000607370 168 ntBASIC13.18□□□□□ -0.3
SRPXP78539 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.18□□□□□ -0.3
SRPXP78539 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms