Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.52■□□□□ 0.4
CPT1AP50416 KRT90P-201ENST00000549264 1064 ntBASIC17.52■□□□□ 0.4
CPT1AP50416 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.52■□□□□ 0.4
CPT1AP50416 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.52■□□□□ 0.4
CPT1AP50416 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.52■□□□□ 0.4
CPT1AP50416 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.52■□□□□ 0.4
CPT1AP50416 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.52■□□□□ 0.4
CPT1AP50416 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CPT1AP50416 AC010328.2-201ENST00000597698 1111 ntBASIC17.52■□□□□ 0.4
CPT1AP50416 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.52■□□□□ 0.4
CPT1AP50416 MIR6787-201ENST00000616675 61 ntBASIC17.52■□□□□ 0.4
CPT1AP50416 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CPT1AP50416 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
CPT1AP50416 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.52■□□□□ 0.39
CPT1AP50416 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.52■□□□□ 0.39
CPT1AP50416 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 KRT8P44-201ENST00000441609 1350 ntBASIC17.52■□□□□ 0.39
CPT1AP50416 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPT1AP50416 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CPT1AP50416 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.52■□□□□ 0.39
CPT1AP50416 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CPT1AP50416 FLJ38576-201ENST00000623820 2459 ntBASIC17.52■□□□□ 0.39
CPT1AP50416 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.52■□□□□ 0.39
CPT1AP50416 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CPT1AP50416 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CPT1AP50416 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.51■□□□□ 0.39
CPT1AP50416 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 PFN1P12-201ENST00000455938 534 ntBASIC17.51■□□□□ 0.39
CPT1AP50416 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.51■□□□□ 0.39
CPT1AP50416 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AC107373.2-201ENST00000607735 490 ntBASIC17.51■□□□□ 0.39
CPT1AP50416 AC244669.2-201ENST00000612320 853 ntBASIC17.51■□□□□ 0.39
CPT1AP50416 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPT1AP50416 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.51■□□□□ 0.39
CPT1AP50416 AC011477.6-201ENST00000604980 1927 ntBASIC17.51■□□□□ 0.39
CPT1AP50416 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.51■□□□□ 0.39
CPT1AP50416 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.5■□□□□ 0.39
CPT1AP50416 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CPT1AP50416 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.5■□□□□ 0.39
CPT1AP50416 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.5■□□□□ 0.39
CPT1AP50416 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.5■□□□□ 0.39
CPT1AP50416 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.5■□□□□ 0.39
CPT1AP50416 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.5■□□□□ 0.39
CPT1AP50416 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPT1AP50416 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.5■□□□□ 0.39
CPT1AP50416 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms