Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCN1P35523 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCN1P35523 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.21■□□□□ 0.51
CLCN1P35523 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCN1P35523 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
CLCN1P35523 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCN1P35523 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLCN1P35523 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.21■□□□□ 0.5
CLCN1P35523 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
CLCN1P35523 HSPA7-201ENST00000445535 1927 ntBASIC18.2■□□□□ 0.5
CLCN1P35523 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.2■□□□□ 0.5
CLCN1P35523 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN1P35523 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.2■□□□□ 0.5
CLCN1P35523 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC18.2■□□□□ 0.5
CLCN1P35523 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CLCN1P35523 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 AC006504.4-201ENST00000592118 1568 ntBASIC18.2■□□□□ 0.5
CLCN1P35523 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLCN1P35523 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLCN1P35523 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.2■□□□□ 0.5
CLCN1P35523 AC092127.1-201ENST00000567093 3455 ntBASIC18.19■□□□□ 0.5
CLCN1P35523 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLCN1P35523 PTCHD3P3-201ENST00000403073 906 ntBASIC18.19■□□□□ 0.5
CLCN1P35523 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN1P35523 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.19■□□□□ 0.5
CLCN1P35523 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN1P35523 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.19■□□□□ 0.5
CLCN1P35523 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.19■□□□□ 0.5
CLCN1P35523 PAWRP1-201ENST00000451083 565 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms