Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GJA1P17302 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.47■□□□□ 0.23
GJA1P17302 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 AC134915.1-201ENST00000426461 574 ntBASIC16.47■□□□□ 0.23
GJA1P17302 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 CTBP2P5-201ENST00000454986 1264 ntBASIC16.47■□□□□ 0.23
GJA1P17302 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.47■□□□□ 0.23
GJA1P17302 VDAC1P7-201ENST00000462417 847 ntBASIC16.47■□□□□ 0.23
GJA1P17302 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.47■□□□□ 0.23
GJA1P17302 AL049840.4-201ENST00000602422 811 ntBASIC16.47■□□□□ 0.23
GJA1P17302 AC097359.3-201ENST00000603982 1210 ntBASIC16.47■□□□□ 0.23
GJA1P17302 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.47■□□□□ 0.23
GJA1P17302 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GJA1P17302 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GJA1P17302 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.47■□□□□ 0.23
GJA1P17302 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GJA1P17302 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.46■□□□□ 0.23
GJA1P17302 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.46■□□□□ 0.23
GJA1P17302 INTS4P2-202ENST00000614726 2019 ntBASIC16.46■□□□□ 0.23
GJA1P17302 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.46■□□□□ 0.23
GJA1P17302 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.46■□□□□ 0.23
GJA1P17302 AC136604.1-201ENST00000418535 575 ntBASIC16.46■□□□□ 0.23
GJA1P17302 ACTG1P3-201ENST00000431775 1114 ntBASIC16.46■□□□□ 0.23
GJA1P17302 KRT43P-201ENST00000434019 910 ntBASIC16.46■□□□□ 0.23
GJA1P17302 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
GJA1P17302 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.46■□□□□ 0.23
GJA1P17302 AC092658.1-201ENST00000505836 891 ntBASIC16.46■□□□□ 0.23
GJA1P17302 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.46■□□□□ 0.23
GJA1P17302 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.46■□□□□ 0.23
GJA1P17302 AC124283.3-201ENST00000570869 594 ntBASIC16.46■□□□□ 0.23
GJA1P17302 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.46■□□□□ 0.23
GJA1P17302 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GJA1P17302 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GJA1P17302 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GJA1P17302 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GJA1P17302 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.22
GJA1P17302 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
GJA1P17302 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.45■□□□□ 0.22
GJA1P17302 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 AC093525.8-201ENST00000624099 1342 ntBASIC16.45■□□□□ 0.22
GJA1P17302 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
GJA1P17302 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GJA1P17302 NKILA-202ENST00000614771 2598 ntBASIC16.45■□□□□ 0.22
GJA1P17302 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 MSTO2P-201ENST00000314835 1709 ntBASIC16.45■□□□□ 0.22
GJA1P17302 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GJA1P17302 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms