Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 U91328.1-201ENST00000437528 223 ntBASIC15.03■□□□□ -0
RAB40ALP0C0E4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 RARRES2P5-201ENST00000564013 466 ntBASIC15.03■□□□□ -0
RAB40ALP0C0E4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 IGHV3-72-202ENST00000621503 303 ntBASIC15.03■□□□□ -0
RAB40ALP0C0E4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.03■□□□□ -0
RAB40ALP0C0E4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RAB40ALP0C0E4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 KRT8P37-201ENST00000451609 1420 ntBASIC15.02■□□□□ -0
RAB40ALP0C0E4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 PKD1P5-201ENST00000532415 10291 ntBASIC15.02■□□□□ -0
RAB40ALP0C0E4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB40ALP0C0E4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 TMEM261P1-201ENST00000604899 340 ntBASIC15.02■□□□□ -0
RAB40ALP0C0E4 AL008721.1-201ENST00000609964 604 ntBASIC15.02■□□□□ -0
RAB40ALP0C0E4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.02■□□□□ -0
RAB40ALP0C0E4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB40ALP0C0E4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB40ALP0C0E4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms