Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
LTAP01374 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.05□□□□□ -0.48
LTAP01374 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.05□□□□□ -0.48
LTAP01374 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.05□□□□□ -0.48
LTAP01374 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.05□□□□□ -0.48
LTAP01374 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AJ011931.1-201ENST00000618749 2492 ntBASIC12.05□□□□□ -0.48
LTAP01374 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.05□□□□□ -0.48
LTAP01374 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.05□□□□□ -0.48
LTAP01374 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.05□□□□□ -0.48
LTAP01374 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LTAP01374 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LTAP01374 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LTAP01374 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LTAP01374 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LTAP01374 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.04□□□□□ -0.48
LTAP01374 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 HMGA1P7-201ENST00000406908 502 ntBASIC12.04□□□□□ -0.48
LTAP01374 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.04□□□□□ -0.48
LTAP01374 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 TMPOP1-202ENST00000424642 1267 ntBASIC12.04□□□□□ -0.48
LTAP01374 KRT18P27-201ENST00000427733 1299 ntBASIC12.04□□□□□ -0.48
LTAP01374 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.04□□□□□ -0.48
LTAP01374 AC136632.2-201ENST00000512891 861 ntBASIC12.04□□□□□ -0.48
LTAP01374 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.04□□□□□ -0.48
LTAP01374 IGHV3-65-201ENST00000523210 341 ntBASIC12.04□□□□□ -0.48
LTAP01374 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.04□□□□□ -0.48
LTAP01374 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.04□□□□□ -0.48
LTAP01374 AC107918.4-202ENST00000641623 219 ntBASIC12.04□□□□□ -0.48
LTAP01374 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.04□□□□□ -0.48
LTAP01374 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 AL589702.1-201ENST00000641229 1509 ntBASIC12.04□□□□□ -0.48
LTAP01374 AL365209.1-201ENST00000624418 6473 ntBASIC12.04□□□□□ -0.48
LTAP01374 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
LTAP01374 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.04□□□□□ -0.48
LTAP01374 OR2I1P-209ENST00000641730 5365 ntBASIC12.04□□□□□ -0.48
LTAP01374 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LTAP01374 AL161772.1-201ENST00000610494 4412 ntBASIC12.04□□□□□ -0.48
LTAP01374 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.04□□□□□ -0.48
LTAP01374 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms