Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.39■□□□□ 0.05
CPNE3O75131 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 AC005034.1-201ENST00000426657 489 ntBASIC15.39■□□□□ 0.05
CPNE3O75131 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 SPTLC1P1-201ENST00000447199 261 ntBASIC15.39■□□□□ 0.05
CPNE3O75131 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.39■□□□□ 0.05
CPNE3O75131 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 U82695.1-201ENST00000635752 1889 ntBASIC15.39■□□□□ 0.05
CPNE3O75131 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE3O75131 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE3O75131 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 RNF216P1-203ENST00000404404 2427 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 GGT3P-204ENST00000453783 1664 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.38■□□□□ 0.05
CPNE3O75131 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 PAUPAR-201ENST00000630360 2965 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CPNE3O75131 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE3O75131 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE3O75131 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 ZNF890P-202ENST00000530367 1156 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 AC009407.1-201ENST00000568958 598 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 AC008738.7-201ENST00000609744 511 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 AL035252.4-201ENST00000624174 288 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.38■□□□□ 0.05
CPNE3O75131 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 BTBD7P1-201ENST00000447253 1453 ntBASIC15.38■□□□□ 0.05
CPNE3O75131 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE3O75131 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.38■□□□□ 0.05
CPNE3O75131 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE3O75131 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE3O75131 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CPNE3O75131 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE3O75131 AC105917.1-201ENST00000506637 2539 ntBASIC15.37■□□□□ 0.05
CPNE3O75131 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE3O75131 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms