Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TCRBV3S1A0A5B6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 AC067930.6-201ENST00000623257 4947 ntBASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 AC006504.5-208ENST00000588784 2401 ntBASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 PCED1CP-201ENST00000419887 785 ntBASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 AC107918.4-202ENST00000641623 219 ntBASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.94□□□□□ -0.02
TCRBV3S1A0A5B6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 AC211429.1-201ENST00000415277 523 ntBASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 BX640514.1-201ENST00000583223 1918 ntBASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TCRBV3S1A0A5B6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TCRBV3S1A0A5B6 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms